Class 12 · Biotechnology: Principles and Processes

DNA Electrophoresis & Fragment Separation — NEET Biology

✅ Asked in NEET 2025
✅ NEET 2025 PYQ · Asked 2 times

Which one of the following statements is incorrect regarding gel electrophoresis? (NEET 2025)

Q1 of 2NEET 2025

Which one of the following statements is incorrect regarding gel electrophoresis? (NEET 2025)

Q2 of 2NEET 2017

What is the criterion for DNA fragments movement on agarose gel during gel electrophoresis? (NEET 2017)

Answer & NCERT explanation

Correct answer: B DNA moves towards cathode due to negative charge

DNA moves towards anode (positive electrode), not cathode, during gel electrophoresis because DNA has negative charge due to phosphate groups. The cathode is the negative electrode. All other statements are correct: DNA separates by size, agarose acts as sieving matrix, and ethidium bromide stains DNA. This is a fundamental concept in molecular biology techniques.

Read more NCERT concept on the PYQ

📖 NCERT Source

Separation and isolation of DNA fragments: The cutting of DNA by restriction endonucleases results in the fragments of DNA. These fragments can be separated by a technique known as gel electrophoresis. Since DNA fragments are negatively charged molecules they can be separated by forcing them to move towards the anode under an electric field through a medium/matrix. Nowadays the most commonly used matrix is agarose which is a natural polymer extracted from sea weeds. The DNA fragments separate (resolve) according to their size through sieving effect provided by the agarose gel. Hence, the smaller the fragment size, the farther it moves. Look at the and guess at which end of the gel the sample was loaded.

📐See NCERT Figure 9.3 for the diagram.
NCERT Biology · Class 12 · Chapter 9 · Paragraph 29
How NTA Uses This Concept

NTA tests whether students understand that DNA moves toward the anode in gel electrophoresis because DNA is negatively charged. Students often forget which electrode is anode or why smaller fragments move farther. The key trap: confusing the direction of movement or thinking larger fragments move faster. Remember: DNA always migrates toward the positive electrode (anode) due to its phosphate backbone's negative charge. Smaller fragments navigate through agarose pores easily, traveling farther, while larger fragments get trapped—this sieving effect is crucial. NEET asks both about the principle and practical details like where samples are loaded (negative end/cathode side).

❓ Frequently Asked Questions
What does NCERT say about Separation and isolation DNA?
Separation and isolation of DNA fragments: The cutting of DNA by restriction endonucleases results in the fragments of DNA. These fragments can be separated by a technique known as gel electrophoresis.
Has this concept appeared in NEET?
Yes — appeared in NEET 2025, 2017. States DNA moves towards anode due to negative charge
Which chapter is this from?
Biotechnology: Principles and Processes, Class 12 NCERT Biology.

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