Transcription Unit and the Gene: Exons, Introns and Split Genes

Biology · Molecular Basis of Inheritance · NEET

A gene is a segment of DNA that codes for a product (a polypeptide, or an RNA like tRNA/rRNA). In eukaryotes the structural gene is split: coding parts called exons appear in the mature RNA, and non-coding parts called introns are removed. Memory hook: EXons are EXpressed, INtrons stay IN the nucleus (thrown out).
Split Gene (Eukaryote): Exons and IntronsSplit gene in DNAE1I1E2I2E3splicing: introns removedMature mRNAE1E2E3Exon = EXpressed (kept in mature RNA)Intron = INtervening (removed, absent in mRNA)
In a eukaryotic split gene, coding exons (green) are interrupted by non-coding introns (grey). During processing the introns are spliced out, and only the exons are joined to form the mature mRNA.

Your doubts, answered

What is the difference between an exon and an intron?

Exons are the coding (expressed) sequences that appear in the mature or processed RNA. Introns, also called intervening sequences, do NOT appear in the mature RNA; they are removed during processing. Memory hook: EXon = EXpressed (kept), INtron = IN nucleus (removed).

What is a split gene?

In eukaryotes the coding sequence of a structural gene is not continuous. It is interrupted: exons are broken up by introns. This interrupted arrangement is called a split gene. NCERT states genes in eukaryotes are split, so split genes are a EUKARYOTIC feature, not prokaryotic.

Is a gene the same thing as a transcription unit?

No. A transcription unit has three parts: promoter, the structural gene, and terminator. The structural gene is only the part that is actually transcribed into RNA. So the gene (structural gene) is one part of the transcription unit, not the whole unit.

What is the difference between monocistronic and polycistronic genes?

A cistron is a segment of DNA coding for one polypeptide. A monocistronic structural gene codes for one polypeptide (mostly in eukaryotes). A polycistronic gene codes for many polypeptides (mostly in bacteria/prokaryotes). Split genes with exons and introns are seen in the monocistronic eukaryotic genes.

Do introns appear in mature mRNA?

No. Introns are removed during RNA processing (splicing), so they are absent from the mature mRNA. Only exons remain and are joined together. This is a common NEET trap: students wrongly think introns are copied into the final message.

What is a cistron?

A cistron is defined as a segment of DNA that codes for a polypeptide. It is the molecular equivalent of a structural gene. Muton and recon are units of mutation and recombination, and an operon is a group of genes regulated together, so they are different terms.

⚠️ The NEET trap
Split gene arrangement (exons interrupted by introns) is a characteristic of prokaryotes.
Split genes are a characteristic of EUKARYOTES. In prokaryotes the mRNA needs no processing and genes are usually polycistronic and not split.
🧠 NCERT says clearly: 'the genes in eukaryotes are split.' If a NEET option puts split genes in prokaryotes, it is FALSE. Splicing = eukaryotic.

Real NEET questions

NEET 2016

The equivalent of a structural gene is

A · Muton
B · Cistron
C · Operon
D · Recon
Solution: A cistron is a segment of DNA coding for a polypeptide, which is exactly the structural gene of a transcription unit. Muton and recon are units of mutation and recombination; an operon is a group of genes regulated together.
NEET 2021

Identify the correct statement.

A · The coding strand in a transcription unit is copied to an mRNA
B · Split gene arrangement is characteristic of prokaryotes
C · In capping, methyl guanosine triphosphate is added to the 3' end of hnRNA
D · RNA polymerase binds with Rho factor to terminate the process of transcription in bacteria
Solution: Option D is correct: the Rho factor helps terminate transcription in bacteria. The others are traps: the TEMPLATE strand (not coding) is copied; split genes are a EUKARYOTIC (not prokaryotic) feature; and capping adds methyl guanosine to the 5' end (not 3').

Solved Molecular Basis of Inheritance NEET PYQs

Try the real previous-year questions from this chapter — each with the answer and a full solution.

See all 88 Molecular Basis of Inheritance NEET PYQs ›
Next concept: Types of RNAKeep learning — 2 minFeeling ready? Solve the Molecular Basis of Inheritance NEET PYQs ›Or practice on your phone — get the free MedicNEET app ›

Frequently asked

Are split genes found in prokaryotes or eukaryotes?

Split genes are found in eukaryotes. NCERT states the genes in eukaryotes are split, with exons interrupted by introns. Prokaryotic mRNA does not require processing.

Which sequences appear in the mature RNA, exons or introns?

Only exons (the expressed coding sequences) appear in the mature or processed RNA. Introns are removed and do not appear in the final mRNA.

Why is defining a gene difficult?

Because a gene can code for a polypeptide, or for tRNA/rRNA, and because eukaryotic genes are split (exons and introns), plus inheritance is also affected by promoter and regulatory sequences. So a gene is not simply one continuous DNA segment.

Are eukaryotic genes monocistronic or polycistronic?

Eukaryotic structural genes are mostly monocistronic (one gene, one polypeptide). Bacterial/prokaryotic genes are mostly polycistronic (many polypeptides from one unit).

What are regulatory genes?

Promoter and regulatory sequences of a structural gene affect inheritance of a character, so these regulatory sequences are sometimes loosely called regulatory genes, even though they do not code for a product themselves.